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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
113752

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCDHB15 HGNC:8686 (HGNC)
56121 (Entrez Gene)
606341 (OMIM)
PCDHB15 (MyGene.info)
HGNC homology
Chr5 q31.3 Chr5:141245349-141248234 (+)
GRCh38.p7
Q9Y5E8 (UniProt | EBI)
NM_018935 (RefSeq)
mouse Pcdhb22 MGI:2136760 (MGI)
93893 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 19.51 cM Chr18:37518353-37521419 (+)
GRCm38
93893 (NCBI Gene Model)
NP_444377 (RefSeq)
NM_053147 (RefSeq)
rat Pcdhb22 307486 (Entrez Gene)
Chr18 p11 XP_001065549 (RefSeq)
chimpanzee PCDHB15 462137 (Entrez Gene)
Chr5 Q5DRD3 (UniProt | EBI)
NM_001013011 (RefSeq)
cattle PCDHB15 787005 (Entrez Gene)
Chr7
dog LOC487178 487178 (Entrez Gene)
Chr2 XP_005617354 (RefSeq)
macaque, rhesus PCDHB15 701476 (Entrez Gene)
Chr6 XP_001092245 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/05/2019
MGI 6.14
The Jackson Laboratory