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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
113718

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Ly6a MGI:107527 (MGI)
110454 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 34.29 cM Chr15:74994877-74998031 (-)
GRCm38
osteoporosis
110454 (NCBI Gene Model)
P05533 (UniProt | EBI)
NM_001271416 (RefSeq)
Ly6a2 MGI:3612406 (MGI)
546643 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 34.29 cM Chr15:75131377-75135128 (-)
GRCm38
ENSMUSG00000102051 (Ensembl Gene Model)
NP_001365169 (RefSeq)
ENSMUST00000187250 (Ensembl)
Ly6c1 MGI:96882 (MGI)
17067 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 34.29 cM Chr15:75044018-75048830 (-)
GRCm38
ENSMUSG00000079018 (Ensembl Gene Model)
ENSMUSP00000139559 (Ensembl)
ENSMUST00000188845 (Ensembl)
Ly6c2 MGI:3712069 (MGI)
100041546 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 34.29 cM Chr15:75108158-75111970 (-)
GRCm38
ENSMUSG00000022584 (Ensembl Gene Model)
ENSMUSP00000098110 (Ensembl)
ENSMUST00000100542 (Ensembl)
Ly6f MGI:109441 (MGI)
17071 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 34.29 cM Chr15:75268421-75272235 (+)
GRCm38
ENSMUSG00000022583 (Ensembl Gene Model)
ENSMUSP00000023247 (Ensembl)
ENSMUST00000023247 (Ensembl)
Ly6g MGI:109440 (MGI)
546644 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 34.29 cM Chr15:75155261-75159128 (+)
GRCm38
546644 (NCBI Gene Model)
P35461 (UniProt | EBI)
NM_001310438 (RefSeq)
Ly6i MGI:1888480 (MGI)
57248 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 34.29 cM Chr15:74979534-74983430 (-)
GRCm38
ENSMUSG00000022586 (Ensembl Gene Model)
ENSMUSP00000023250 (Ensembl)
ENSMUST00000023250 (Ensembl)
rat LOC300024 300024 (Entrez Gene)
Chr7 q34 XP_038936195 (RefSeq)
LOC100911104 100911104 (Entrez Gene)
Chr14
Ly6al 362935 (Entrez Gene)
Chr7 q34 NP_001121571 (RefSeq)
NM_001128099 (RefSeq)
Ly6c 56778 (Entrez Gene)
Chr7 q34 NP_064488 (RefSeq)
NM_020103 (RefSeq)
Ly6i 246138 (Entrez Gene)
Chr7 q34 Q63317 (UniProt | EBI)
NM_139257 (RefSeq)
RGD1565410 503162 (Entrez Gene)
Chr7 q34 NP_001107264 (RefSeq)
NM_001113792 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/16/2021
MGI 6.16
The Jackson Laboratory