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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
1136

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GATM HGNC:4175 (HGNC)
2628 (Entrez Gene)
602360 (OMIM)
Chr15 q21.1 Chr15:45361124-45378782 (-)
GRCh38
Cerebral Creatine Deficiency Syndrome 3; CCDS3
P50440 (UniProt | EBI)
NM_001482 (RefSeq)
mouse Gatm MGI:1914342 (MGI)
67092 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 60.63 cM Chr2:122594467-122611303 (-)
GRCm38
OTTMUSG00000015672 (VEGA)
OTTMUSP00000016683 (VEGA)
OTTMUST00000037236 (VEGA)
rat Gatm 81660 (Entrez Gene)
Chr3 q35 P50442 (UniProt | EBI)
NM_031031 (RefSeq)
chimpanzee GATM 453401 (Entrez Gene)
Chr15 XP_001163621 (RefSeq)
rhesus macaque GATM 713306 (Entrez Gene)
Chr7 XP_001111561 (RefSeq)
cattle GATM 414732 (Entrez Gene)
Chr10 Q2HJ74 (UniProt | EBI)
NM_001045878 (RefSeq)
dog GATM 414733 (Entrez Gene)
Chr30 NP_001274013 (RefSeq)
NM_001287084 (RefSeq)
chicken GATM 395504 (Entrez Gene)
Chr10 Q9I9K9 (UniProt | EBI)
NM_204745 (RefSeq)
zebrafish gatm 266799 (Entrez Gene)
Chr18 Q6PH19 (UniProt | EBI)
NM_199531 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/15/2014
MGI 5.17
The Jackson Laboratory