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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human C5orf42 HGNC:25801 (HGNC)
65250 (Entrez Gene)
614571 (OMIM)
C5orf42 (MyGene.info)
HGNC homology
Chr5 p13.2 Chr5:37063928-37249428 (-)
Joubert syndrome 17
Joubert syndrome with orofaciodigital defect
Q9H799 (UniProt | EBI)
NM_023073 (RefSeq)
mouse 2410089E03Rik MGI:1920942 (MGI)
73692 (Entrez Gene)
Gene Tree
HGNC homology
Chr15 3.82 cM Chr15:8169106-8271158 (+)
Joubert syndrome 17
OTTMUSG00000022443 (VEGA)
OTTMUSP00000025520 (VEGA)
OTTMUST00000053654 (VEGA)
chimpanzee C5H5orf42 461916 (Entrez Gene)
Chr5 XP_009447542 (RefSeq)
cattle C20H5orf42 533903 (Entrez Gene)
Chr20 XP_015323848 (RefSeq)
dog C4H5orf42 479361 (Entrez Gene)
Chr4 XP_013968613 (RefSeq)
chicken CZH5ORF42 427440 (Entrez Gene)
ChrZ XP_015133011 (RefSeq)
zebrafish si:ch73-209l12.1 792625 (Entrez Gene)
Chr10 XP_021334903 (RefSeq)
macaque, rhesus C6H5orf42 701698 (Entrez Gene)
Chr6 XP_014995370 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory