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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11315

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human C5orf42 HGNC:25801 (HGNC)
65250 (Entrez Gene)
614571 (OMIM)
Chr5 p13.2 Chr5:37067870-37249428 (-)
GRCh38
Joubert Syndrome 1; JBTS1
Joubert Syndrome 17; JBTS17
Orofaciodigital Syndrome VI; OFD6
Q9H799 (UniProt | EBI)
NM_023073 (RefSeq)
mouse 2410089E03Rik MGI:1920942 (MGI)
73692 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 3.82 cM Chr15:8169106-8271158 (+)
GRCm38
OTTMUSG00000022443 (VEGA)
OTTMUSP00000025520 (VEGA)
OTTMUST00000053654 (VEGA)
chimpanzee C5H5orf42 461916 (Entrez Gene)
Chr5 XP_517801 (RefSeq)
rhesus macaque LOC701698 701698 (Entrez Gene)
Chr6 XP_002804390 (RefSeq)
cattle C20H5orf42 533903 (Entrez Gene)
Chr20 XP_613463 (RefSeq)
dog C4H5orf42 479361 (Entrez Gene)
Chr4 XP_536501 (RefSeq)
chicken CZH5orf42 427440 (Entrez Gene)
ChrZ XP_001234077 (RefSeq)
zebrafish si:ch73-209l12.1 792625 (Entrez Gene)
Chr10 XP_009303336 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory