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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human UPF3B HGNC:20439 (HGNC)
65109 (Entrez Gene)
300298 (OMIM)
UPF3B (MyGene.info)
HGNC homology
ChrX q24 ChrX:119805311-119853028 (-)
syndromic X-linked intellectual disability 14
Q9BZI7 (UniProt | EBI)
NM_023010 (RefSeq)
mouse Upf3b MGI:1915384 (MGI)
68134 (Entrez Gene)
Gene Tree
HGNC homology
ChrX 21.51 cM ChrX:37091678-37110322 (-)
OTTMUSG00000017109 (VEGA)
OTTMUSP00000018591 (VEGA)
OTTMUST00000041431 (VEGA)
rat Upf3b 313449 (Entrez Gene)
ChrX q35 NP_001129345 (RefSeq)
NM_001135873 (RefSeq)
chimpanzee UPF3B 465954 (Entrez Gene)
ChrX XP_016798727 (RefSeq)
dog UPF3B 481031 (Entrez Gene)
ChrX XP_851843 (RefSeq)
chicken UPF3B 100858231 (Entrez Gene)
Chr4 NP_001305391 (RefSeq)
NM_001318462 (RefSeq)
zebrafish upf3b 393929 (Entrez Gene)
Chr14 NP_957248 (RefSeq)
NM_200954 (RefSeq)
frog, western clawed upf3b 100145010 (Entrez Gene)
Chr8 XP_017952298 (RefSeq)
macaque, rhesus UPF3B 694247 (Entrez Gene)
ChrX NP_001253666 (RefSeq)
NM_001266737 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory