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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11290

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NT5DC2 HGNC:25717 (HGNC)
64943 (Entrez Gene)
HGNC homology
Chr3 p21.1 Chr3:52524369-52535077 (-)
GRCh38.p7
Q9H857 (UniProt | EBI)
NM_022908 (RefSeq)
mouse Nt5dc2 MGI:1917271 (MGI)
70021 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr14 19.09 cM Chr14:31131089-31139124 (+)
GRCm38
70021 (NCBI Gene Model)
NP_001361016 (RefSeq)
NM_001374087 (RefSeq)
rat Nt5dc2 290558 (Entrez Gene)
Chr16 p16 Q6Q0N3 (UniProt | EBI)
NM_001009271 (RefSeq)
chimpanzee NT5DC2 746453 (Entrez Gene)
Chr3 XP_024211263 (RefSeq)
cattle NT5DC2 514296 (Entrez Gene)
Chr22 XP_003587683 (RefSeq)
dog NT5DC2 100855678 (Entrez Gene)
Chr20 XP_038283482 (RefSeq)
chicken NT5DC2 415895 (Entrez Gene)
Chr12 XP_414247 (RefSeq)
zebrafish nt5dc2 556186 (Entrez Gene)
Chr8 NP_001070611 (RefSeq)
NM_001077143 (RefSeq)
frog, western clawed nt5dc2 100124988 (Entrez Gene)
Chr8 NP_001096388 (RefSeq)
NM_001102918 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
04/06/2021
MGI 6.16
The Jackson Laboratory