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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11259

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human EFCAB6 HGNC:24204 (HGNC)
64800 (Entrez Gene)
EFCAB6 (MyGene.info)
HGNC homology
Chr22 q13.2-q13.31 Chr22:43528549-43812403 (-)
GRCh38.p7
Q5THR3 (UniProt | EBI)
NM_198856 (RefSeq)
mouse Efcab6 MGI:1924877 (MGI)
77627 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 39.48 cM Chr15:83866712-84065379 (-)
GRCm38
OTTMUSG00000026031 (VEGA)
OTTMUSP00000031879 (VEGA)
OTTMUST00000064245 (VEGA)
rat Efcab6 315179 (Entrez Gene)
Chr7 q34 XP_008764034 (RefSeq)
chimpanzee EFCAB6 458892 (Entrez Gene)
Chr22 XP_016794831 (RefSeq)
cattle EFCAB6 535401 (Entrez Gene)
Chr5 XP_005207519 (RefSeq)
NM_001076057 (RefSeq)
dog EFCAB6 481218 (Entrez Gene)
Chr10 XP_538339 (RefSeq)
zebrafish efcab6 492579 (Entrez Gene)
Chr25 NP_001296412 (RefSeq)
NM_001309483 (RefSeq)
frog, western clawed efcab6 100158626 (Entrez Gene)
ChrUN XP_017945480 (RefSeq)
macaque, rhesus EFCAB6 712043 (Entrez Gene)
Chr10 XP_015006015 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/31/2018
MGI 6.12
The Jackson Laboratory