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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11204

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SUSD1 HGNC:25413 (HGNC)
64420 (Entrez Gene)
HGNC homology
Chr9 q31.3-q32 Chr9:112040781-112175520 (-)
GRCh38.p7
Q6UWL2 (UniProt | EBI)
NM_022486 (RefSeq)
mouse Susd1 MGI:3651543 (MGI)
634731 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 32.5 cM Chr4:59314683-59438633 (-)
GRCm38
ENSMUSG00000038578 (Ensembl Gene Model)
ENSMUSP00000048201 (Ensembl)
ENSMUST00000040166 (Ensembl)
rat Susd1 298031 (Entrez Gene)
Chr5 q24 XP_006238274 (RefSeq)
NM_001106650 (RefSeq)
chimpanzee SUSD1 464662 (Entrez Gene)
Chr9 XP_016816925 (RefSeq)
cattle SUSD1 518850 (Entrez Gene)
Chr8 XP_002689991 (RefSeq)
dog SUSD1 481667 (Entrez Gene)
Chr11 XP_013973396 (RefSeq)
chicken SUSD1 427334 (Entrez Gene)
ChrZ XP_424913 (RefSeq)
frog, western clawed susd1 394830 (Entrez Gene)
Chr1 NP_989222 (RefSeq)
NM_203891 (RefSeq)
macaque, rhesus SUSD1 707656 (Entrez Gene)
Chr15 XP_028690818 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory