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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1117

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FOXJ1 HGNC:3816 (HGNC)
2302 (Entrez Gene)
602291 (OMIM)
Chr17 q25.1 Chr17:76136333-76141299 (-)
GRCh38
Q92949 (UniProt | EBI)
NM_001454 (RefSeq)
mouse Foxj1 MGI:1347474 (MGI)
15223 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 81.16 cM Chr11:116330704-116335399 (-)
GRCm38
OTTMUSG00000003841 (VEGA)
OTTMUSP00000004095 (VEGA)
OTTMUST00000008445 (VEGA)
rat Foxj1 116557 (Entrez Gene)
Chr10 Q63247 (UniProt | EBI)
NM_053832 (RefSeq)
chimpanzee FOXJ1 454899 (Entrez Gene)
Chr17 XP_511694 (RefSeq)
rhesus macaque FOXJ1 706275 (Entrez Gene)
Chr16 XP_001104114 (RefSeq)
cattle FOXJ1 505891 (Entrez Gene)
Chr19 NP_001179005 (RefSeq)
NM_001192076 (RefSeq)
dog FOXJ1 475917 (Entrez Gene)
Chr9 XP_533124 (RefSeq)
chicken FOXJ1 770009 (Entrez Gene)
Chr18 XP_001233327 (RefSeq)
western clawed frog foxj1 496834 (Entrez Gene)
ChrUN Q5M7N6 (UniProt | EBI)
NM_001011367 (RefSeq)
zebrafish foxj1a 767737 (Entrez Gene)
Chr3 F1QDF8 (UniProt | EBI)
NM_001076706 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory