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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11156

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NOD2 HGNC:5331 (HGNC)
64127 (Entrez Gene)
605956 (OMIM)
Chr16 q21 Chr16:50693596-50733079 (+)
GRCh38
Blau Syndrome
Inflammatory Bowel Disease 1; IBD1
Psoriatic Arthritis, Susceptibility to Psoriatic Arthritis, Susceptibility to, 1; PSORAS1
Sarcoidosis, Early-Onset
Q9HC29 (UniProt | EBI)
NM_022162 (RefSeq)
mouse Nod2 MGI:2429397 (MGI)
257632 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 43.51 cM Chr8:88647315-88688474 (+)
GRCm38
Inflammatory Bowel Disease 1; IBD1
OTTMUSG00000029844 (VEGA)
OTTMUSP00000038426 (VEGA)
OTTMUST00000074063 (VEGA)
rat Nod2 291912 (Entrez Gene)
Chr19 p11 NP_001099642 (RefSeq)
NM_001106172 (RefSeq)
chimpanzee NOD2 454083 (Entrez Gene)
Chr16 Q53B87 (UniProt | EBI)
NM_001105240 (RefSeq)
rhesus macaque NOD2 695542 (Entrez Gene)
Chr20 XP_001084287 (RefSeq)
cattle NOD2 444867 (Entrez Gene)
Chr18 Q6E804 (UniProt | EBI)
NM_001002889 (RefSeq)
dog NOD2 487286 (Entrez Gene)
Chr2 NP_001273968 (RefSeq)
NM_001287039 (RefSeq)
zebrafish nod2 777696 (Entrez Gene)
Chr7 XP_697924 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory