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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11155

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC39A8 HGNC:20862 (HGNC)
64116 (Entrez Gene)
608732 (OMIM)
HGNC homology
Chr4 q24 Chr4:102251041-102345498 (-)
GRCh38.p7
congenital disorder of glycosylation type IIn
Q9C0K1 (UniProt | EBI)
NM_022154 (RefSeq)
mouse Slc39a8 MGI:1914797 (MGI)
67547 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 63.04 cM Chr3:135825279-135888572 (+)
GRCm38
left ventricular noncompaction
ENSMUSG00000053897 (Ensembl Gene Model)
ENSMUSP00000080640 (Ensembl)
ENSMUST00000081978 (Ensembl)
rat Slc39a8 295455 (Entrez Gene)
Chr2 q43 Q5FVQ0 (UniProt | EBI)
NM_001011952 (RefSeq)
chimpanzee SLC39A8 461405 (Entrez Gene)
Chr4 XP_009446346 (RefSeq)
cattle SLC39A8 508193 (Entrez Gene)
Chr6 NP_001192559 (RefSeq)
NM_001205630 (RefSeq)
dog SLC39A8 478494 (Entrez Gene)
Chr32 XP_005639290 (RefSeq)
chicken SLC39A8 430411 (Entrez Gene)
Chr4 XP_015141100 (RefSeq)
zebrafish LOC101885679 101885679 (Entrez Gene)
Chr13
slc39a8 100002893 (Entrez Gene)
Chr13 XP_009305480 (RefSeq)
frog, western clawed slc39a8 100487145 (Entrez Gene)
Chr1 XP_002934812 (RefSeq)
macaque, rhesus SLC39A8 710142 (Entrez Gene)
Chr5 XP_028704479 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory