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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1114

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FOXF1 HGNC:3809 (HGNC)
2294 (Entrez Gene)
601089 (OMIM)
Chr16 q24 Chr16:86510527-86514464 (+)
GRCh38
Alveolar Capillary Dysplasia with Misalignment of Pulmonary Veins;
Q12946 (UniProt | EBI)
NM_001451 (RefSeq)
mouse Foxf1 MGI:1347470 (MGI)
15227 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 70.31 cM Chr8:121084386-121088144 (+)
GRCm38
OTTMUSG00000043020 (VEGA)
OTTMUSP00000063254 (VEGA)
OTTMUST00000112932 (VEGA)
rat Foxf1 687536 (Entrez Gene)
Chr19 XP_001079002 (RefSeq)
chimpanzee FOXF1 468057 (Entrez Gene)
Chr16 XP_523449 (RefSeq)
rhesus macaque FOXF1 694454 (Entrez Gene)
Chr20 XP_001084773 (RefSeq)
cattle FOXF1 524813 (Entrez Gene)
Chr18 XP_002694800 (RefSeq)
dog FOXF1 489672 (Entrez Gene)
Chr5 XP_546792 (RefSeq)
chicken FOXF1 395624 (Entrez Gene)
Chr11 XP_414186 (RefSeq)
western clawed frog foxf1 734087 (Entrez Gene)
ChrUN Q28BS5 (UniProt | EBI)
NM_001045761 (RefSeq)
zebrafish foxf1 566407 (Entrez Gene)
Chr18 A1L1S5 (UniProt | EBI)
NM_001080186 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory