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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11134

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCIF1 HGNC:16200 (HGNC)
63935 (Entrez Gene)
HGNC homology
Chr20 q13.12 Chr20:45934674-45948023 (+)
GRCh38.p7
Q9H4Z3 (UniProt | EBI)
NM_022104 (RefSeq)
mouse Pcif1 MGI:2443858 (MGI)
228866 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 85.27 cM Chr2:164879368-164891437 (+)
GRCm38
228866 (NCBI Gene Model)
P59114 (UniProt | EBI)
NM_146129 (RefSeq)
rat Pcif1 362269 (Entrez Gene)
Chr3 q42 NP_001102075 (RefSeq)
NM_001108605 (RefSeq)
chimpanzee PCIF1 458292 (Entrez Gene)
Chr20 XP_514687 (RefSeq)
cattle PCIF1 535479 (Entrez Gene)
Chr13 NP_001096569 (RefSeq)
NM_001103099 (RefSeq)
dog PCIF1 477249 (Entrez Gene)
Chr24 XP_534442 (RefSeq)
chicken PCIF1 771963 (Entrez Gene)
Chr20 XP_024998201 (RefSeq)
zebrafish pcif1 553360 (Entrez Gene)
Chr6 A0A0R4IKJ1 (UniProt | EBI)
frog, western clawed pcif1 550095 (Entrez Gene)
Chr10 NP_001017341 (RefSeq)
NM_001017341 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory