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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11123

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HPS4 HGNC:15844 (HGNC)
89781 (Entrez Gene)
606682 (OMIM)
Chr22 cen-q12.3 Chr22:26444228-26483863 (-)
GRCh38
Hermansky-Pudlak Syndrome 4; HPS4
Q9NQG7 (UniProt | EBI)
NM_022081 (RefSeq)
mouse Hps4 MGI:2177742 (MGI)
192232 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 54.69 cM Chr5:112343083-112378414 (+)
GRCm38
Hermansky-Pudlak Syndrome 4; HPS4
Storage Pool Platelet Disease
OTTMUSG00000023434 (VEGA)
OTTMUSP00000027431 (VEGA)
OTTMUST00000056959 (VEGA)
rat Hps4 304555 (Entrez Gene)
Chr12 NP_001100618 (RefSeq)
NM_001107148 (RefSeq)
chimpanzee HPS4 458723 (Entrez Gene)
Chr22 XP_001172017 (RefSeq)
rhesus macaque HPS4 712549 (Entrez Gene)
Chr10 XP_001099509 (RefSeq)
cattle HPS4 615386 (Entrez Gene)
Chr17 NP_001069836 (RefSeq)
NM_001076368 (RefSeq)
dog HPS4 486330 (Entrez Gene)
Chr26 XP_543456 (RefSeq)
chicken HPS4 416907 (Entrez Gene)
Chr15 XP_415198 (RefSeq)
western clawed frog hps4 779927 (Entrez Gene)
ChrUN NP_001072472 (RefSeq)
NM_001079004 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory