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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1110

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FAT2 HGNC:3596 (HGNC)
2196 (Entrez Gene)
604269 (OMIM)
HGNC homology
Chr5 q33.1 Chr5:151504092-151594822 (-)
GRCh38.p7
spinocerebellar ataxia 45
Q9NYQ8 (UniProt | EBI)
NM_001447 (RefSeq)
mouse Fat2 MGI:2685369 (MGI)
245827 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 32.5 cM Chr11:55250609-55336564 (-)
GRCm38
ENSMUSG00000055333 (Ensembl Gene Model)
ENSMUSP00000067556 (Ensembl)
ENSMUST00000068853 (Ensembl)
rat Fat2 65048 (Entrez Gene)
Chr10 q22 O88277 (UniProt | EBI)
NM_022954 (RefSeq)
chimpanzee FAT2 462201 (Entrez Gene)
Chr5 XP_016809571 (RefSeq)
cattle FAT2 523046 (Entrez Gene)
Chr7 NP_001179501 (RefSeq)
NM_001192572 (RefSeq)
dog FAT2 479323 (Entrez Gene)
Chr4 XP_536461 (RefSeq)
chicken FAT2 416266 (Entrez Gene)
Chr13 XP_414584 (RefSeq)
zebrafish fat2 568468 (Entrez Gene)
Chr14 XP_001920058 (RefSeq)
frog, western clawed fat2 100488325 (Entrez Gene)
Chr3 XP_017948312 (RefSeq)
macaque, rhesus FAT2 713698 (Entrez Gene)
Chr6 XP_001110265 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory