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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
110886

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SNIP1 HGNC:30587 (HGNC)
79753 (Entrez Gene)
608241 (OMIM)
Chr1 p34.3 Chr1:37534449-37554344 (-)
GRCh38
Psychomotor Retardation, Epilepsy, and Craniofacial Dysmorphism;
Q8TAD8 (UniProt | EBI)
NM_024700 (RefSeq)
mouse Snip1 MGI:2156003 (MGI)
76793 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 57.99 cM Chr4:125066672-125074042 (+)
GRCm38
OTTMUSG00000009251 (VEGA)
OTTMUSP00000009599 (VEGA)
OTTMUST00000020945 (VEGA)
rat LOC100912429 100912429 (Entrez Gene)
Chr15 XP_003751496 (RefSeq)
Snip1 313588 (Entrez Gene)
Chr5 q36 Q5M9G6 (UniProt | EBI)
NM_001014069 (RefSeq)
chimpanzee SNIP1 456759 (Entrez Gene)
Chr1 XP_513324 (RefSeq)
rhesus macaque SNIP1 713733 (Entrez Gene)
Chr1 NP_001244386 (RefSeq)
NM_001257457 (RefSeq)
cattle SNIP1 525944 (Entrez Gene)
Chr3 NP_001192853 (RefSeq)
NM_001205924 (RefSeq)
dog SNIP1 475330 (Entrez Gene)
Chr15 XP_005628989 (RefSeq)
chicken SNIP1 419616 (Entrez Gene)
Chr23 XP_417763 (RefSeq)
western clawed frog snip1 394485 (Entrez Gene)
ChrUN NP_988890 (RefSeq)
NM_203559 (RefSeq)
zebrafish LOC100536907 100536907 (Entrez Gene)
Chr16
snip1 793873 (Entrez Gene)
Chr16 NP_001020641 (RefSeq)
NM_001025470 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory