About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11076

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human TRAPPC11 HGNC:25751 (HGNC)
60684 (Entrez Gene)
614138 (OMIM)
Chr4 q35.1 Chr4:183659267-183713594 (+)
GRCh38
Muscular Dystrophy, Limb-Girdle, Type 2s; LGMD2S
Q7Z392 (UniProt | EBI)
NM_021942 (RefSeq)
mouse Trappc11 MGI:2444585 (MGI)
320714 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 26.86 cM Chr8:47490115-47533470 (-)
GRCm38
OTTMUSG00000028479 (VEGA)
OTTMUSP00000035992 (VEGA)
OTTMUST00000070576 (VEGA)
rat Trappc11 290746 (Entrez Gene)
Chr16 q11 NP_001162586 (RefSeq)
NM_001169115 (RefSeq)
chimpanzee TRAPPC11 471365 (Entrez Gene)
Chr4 XP_009446898 (RefSeq)
rhesus macaque TRAPPC11 702066 (Entrez Gene)
Chr5 XP_001093479 (RefSeq)
cattle TRAPPC11 537211 (Entrez Gene)
Chr27 A6QLC7 (UniProt | EBI)
NM_001102197 (RefSeq)
dog TRAPPC11 482914 (Entrez Gene)
Chr16 XP_540029 (RefSeq)
chicken C4H4ORF41 428748 (Entrez Gene)
Chr4 Q5ZI89 (UniProt | EBI)
NM_001031536 (RefSeq)
western clawed frog trappc11 100170554 (Entrez Gene)
ChrUN NP_001123803 (RefSeq)
NM_001130331 (RefSeq)
zebrafish trappc11 323003 (Entrez Gene)
Chr14 Q1RLX4 (UniProt | EBI)
NM_199626 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/18/2014
MGI 5.20
The Jackson Laboratory