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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
110705

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HBZ HGNC:4835 (HGNC)
3050 (Entrez Gene)
142310 (OMIM)
Chr16 p13.3 Chr16:142922-154505 (+)
GRCh38
P02008 (UniProt | EBI)
NM_005332 (RefSeq)
mouse Hba-x MGI:96019 (MGI)
15126 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 18.86 cM Chr11:32276400-32278116 (+)
GRCm38
Hemoglobin--Alpha Locus 1; HBA1
OTTMUSG00000005373 (VEGA)
OTTMUSP00000034620 (VEGA)
OTTMUST00000068456 (VEGA)
rat Hbz 287168 (Entrez Gene)
Chr10 q12 NP_001166316 (RefSeq)
NM_001172845 (RefSeq)
chimpanzee HBZ 744545 (Entrez Gene)
Chr16 XP_001151351 (RefSeq)
dog LOC100855600 100855600 (Entrez Gene)
Chr6 XP_003639176 (RefSeq)
LOC100855634 100855634 (Entrez Gene)
Chr6 XP_003639178 (RefSeq)
chicken HBZ 416650 (Entrez Gene)
Chr14 P02007 (UniProt | EBI)
NM_001004374 (RefSeq)
LOC100858080 100858080 (Entrez Gene)
Chr14 XP_003643241 (RefSeq)
western clawed frog hba2 100216305 (Entrez Gene)
ChrUN NP_001135724 (RefSeq)
NM_001142252 (RefSeq)
hba3 548658 (Entrez Gene)
ChrUN P08422 (UniProt | EBI)
NM_001015904 (RefSeq)
hba4 100216102 (Entrez Gene)
ChrUN NP_001135556 (RefSeq)
NM_001142084 (RefSeq)
hba-l2 100135125 (Entrez Gene)
ChrUN NP_001107321 (RefSeq)
NM_001113849 (RefSeq)
hba-l3 100335042 (Entrez Gene)
ChrUN NP_001165373 (RefSeq)
NM_001171902 (RefSeq)
hba-l4 100335043 (Entrez Gene)
ChrUN NP_001165374 (RefSeq)
NM_001171903 (RefSeq)
hba-l5 548763 (Entrez Gene)
ChrUN NP_001016009 (RefSeq)
NM_001016009 (RefSeq)
hbz 448669 (Entrez Gene)
ChrUN NP_001005092 (RefSeq)
NM_001005092 (RefSeq)
zebrafish hbaa1 30507 (Entrez Gene)
Chr3 Q90487 (UniProt | EBI)
NM_131257 (RefSeq)
hbae1 30597 (Entrez Gene)
Chr3 NP_891985 (RefSeq)
NM_182940 (RefSeq)
hbz 561790 (Entrez Gene)
Chr12 XP_685362 (RefSeq)
LOC100334599 100334599 (Entrez Gene)
Chr3 XP_002661306 (RefSeq)
si:ch211-5k11.2 572729 (Entrez Gene)
Chr3 XP_001333555 (RefSeq)
si:ch211-5k11.6 497166 (Entrez Gene)
Chr3 NP_001013479 (RefSeq)
NM_001013461 (RefSeq)
si:xx-by187g17.1 497162 (Entrez Gene)
Chr3 NP_001028265 (RefSeq)
NM_001033093 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory