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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11055

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KCNT1 HGNC:18865 (HGNC)
57582 (Entrez Gene)
608167 (OMIM)
Chr9 q34.3 Chr9:135702185-135793147 (+)
GRCh38
Epilepsy, Nocturnal Frontal Lobe, 5; ENFL5
Epileptic Encephalopathy, Early Infantile, 14; EIEE14
Q5JUK3 (UniProt | EBI)
NM_020822 (RefSeq)
mouse Kcnt1 MGI:1924627 (MGI)
227632 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 18.27 cM Chr2:25863795-25918273 (+)
GRCm38
OTTMUSG00000012660 (VEGA)
OTTMUSP00000013573 (VEGA)
OTTMUST00000030153 (VEGA)
rat Kcnt1 60444 (Entrez Gene)
Chr3 p13 Q9Z258 (UniProt | EBI)
NM_021853 (RefSeq)
chimpanzee KCNT1 464846 (Entrez Gene)
Chr9 XP_003312453 (RefSeq)
rhesus macaque LOC721830 721830 (Entrez Gene)
Chr15 XP_001118025 (RefSeq)
cattle KCNT1 529468 (Entrez Gene)
Chr11 XP_607916 (RefSeq)
dog KCNT1 491258 (Entrez Gene)
Chr9 XP_548379 (RefSeq)
chicken KCNT1 395248 (Entrez Gene)
Chr17 Q8QFV0 (UniProt | EBI)
NM_204562 (RefSeq)
western clawed frog kcnt2 100316919 (Entrez Gene)
ChrUN NP_001163984 (RefSeq)
NM_001170513 (RefSeq)
zebrafish kcnt1 100004419 (Entrez Gene)
Chr21 XP_001920632 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory