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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11026

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OTX2 HGNC:8522 (HGNC)
5015 (Entrez Gene)
600037 (OMIM)
Chr14 q22.3 Chr14:56800707-56810476 (-)
GRCh38
Microphthalmia, Syndromic 5; MCOPS5
Pituitary Hormone Deficiency, Combined, 6; CPHD6
P32243 (UniProt | EBI)
NM_021728 (RefSeq)
mouse Otx2 MGI:97451 (MGI)
18424 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 25.36 cM Chr14:48657679-48667644 (-)
GRCm38
OTTMUSG00000032534 (VEGA)
OTTMUSP00000043186 (VEGA)
OTTMUST00000080958 (VEGA)
rat LOC100911492 100911492 (Entrez Gene)
Chr15 XP_003751503 (RefSeq)
chimpanzee OTX2 452927 (Entrez Gene)
Chr14 XP_001163043 (RefSeq)
cattle OTX2 538953 (Entrez Gene)
Chr10 NP_001180130 (RefSeq)
NM_001193201 (RefSeq)
dog OTX2 490708 (Entrez Gene)
Chr8 XP_547830 (RefSeq)
zebrafish otx2 30501 (Entrez Gene)
Chr17 Q91981 (UniProt | EBI)
NM_131251 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory