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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
11003

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRPV4 HGNC:18083 (HGNC)
59341 (Entrez Gene)
605427 (OMIM)
Chr12 q24.1 Chr12:109783087-109833407 (-)
GRCh38
Brachyolmia Type 3
Digital Arthropathy-Brachydactyly, Familial; FDAB
Hereditary Motor and Sensory Neuropathy, Type IIC; HMSN2C
Metatropic Dysplasia
Parastremmatic Dwarfism
Scapuloperoneal Spinal Muscular Atrophy; SPSMA
Spinal Muscular Atrophy, Distal, Congenital Nonprogressive
Spondyloepiphyseal Dysplasia, Maroteaux Type
Spondylometaphyseal Dysplasia, Kozlowski Type; SMDK
Q9HBA0 (UniProt | EBI)
NM_021625 (RefSeq)
mouse Trpv4 MGI:1926945 (MGI)
63873 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 55.99 cM Chr5:114622152-114658421 (-)
GRCm38
Deafness, Autosomal Dominant 25; DFNA25
OTTMUSG00000014501 (VEGA)
OTTMUSP00000015421 (VEGA)
OTTMUST00000034430 (VEGA)
rat Trpv4 66026 (Entrez Gene)
Chr12 q16 Q9ERZ8 (UniProt | EBI)
NM_023970 (RefSeq)
chimpanzee TRPV4 452225 (Entrez Gene)
Chr12 XP_003314024 (RefSeq)
cattle TRPV4 540259 (Entrez Gene)
Chr17 NP_001179314 (RefSeq)
NM_001192385 (RefSeq)
dog TRPV4 486308 (Entrez Gene)
Chr26 NP_001120787 (RefSeq)
NM_001127315 (RefSeq)
chicken TRPV4 395427 (Entrez Gene)
Chr15 NP_990023 (RefSeq)
NM_204692 (RefSeq)
zebrafish trpv4 557850 (Entrez Gene)
Chr5 NP_001036195 (RefSeq)
NM_001042730 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory