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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10795

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LRRC47 HGNC:29207 (HGNC)
57470 (Entrez Gene)
619154 (OMIM)
HGNC homology
Chr1 p36.32 Chr1:3780220-3796504 (-)
GRCh38.p7
Q8N1G4 (UniProt | EBI)
NM_020710 (RefSeq)
mouse Lrrc47 MGI:1920196 (MGI)
72946 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 83.79 cM Chr4:154011803-154021512 (+)
GRCm38
72946 (NCBI Gene Model)
Q505F5 (UniProt | EBI)
NM_201226 (RefSeq)
rat Lrrc47 362672 (Entrez Gene)
Chr5 q36 NP_001129138 (RefSeq)
NM_001135666 (RefSeq)
chimpanzee LRRC47 457237 (Entrez Gene)
Chr1 XP_003307828 (RefSeq)
cattle LRRC47 616209 (Entrez Gene)
Chr16 NP_001095768 (RefSeq)
NM_001102298 (RefSeq)
dog LRRC47 489622 (Entrez Gene)
Chr5 XP_038523447 (RefSeq)
chicken LRRC47 419380 (Entrez Gene)
Chr21 XP_015152579 (RefSeq)
zebrafish lrrc47 553404 (Entrez Gene)
Chr8 NP_001103842 (RefSeq)
NM_001110372 (RefSeq)
frog, western clawed lrrc47 100145802 (Entrez Gene)
Chr7 NP_001120634 (RefSeq)
NM_001127162 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/16/2021
MGI 6.16
The Jackson Laboratory