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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
107244

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VDAC1 HGNC:12669 (HGNC)
7416 (Entrez Gene)
604492 (OMIM)
VDAC1 (MyGene.info)
HGNC homology
Chr5 q31.1 Chr5:133971875-134070987 (-)
GRCh38.p7
P21796 (UniProt | EBI)
NM_003374 (RefSeq)
mouse Vdac1 MGI:106919 (MGI)
22333 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 31.86 cM Chr11:52360860-52389397 (+)
GRCm38
ENSMUSG00000020402 (Ensembl Gene Model)
ENSMUSP00000020673 (Ensembl)
ENSMUST00000020673 (Ensembl)
rat Vdac1 83529 (Entrez Gene)
Chr10 q22 Q9Z2L0 (UniProt | EBI)
NM_031353 (RefSeq)
chimpanzee VDAC1 745717 (Entrez Gene)
Chr5 XP_016809303 (RefSeq)
cattle VDAC1 282119 (Entrez Gene)
Chr7 P45879 (UniProt | EBI)
NM_174485 (RefSeq)
dog VDAC1 474681 (Entrez Gene)
Chr11 XP_013973193 (RefSeq)
chicken VDAC1 416320 (Entrez Gene)
Chr13 NP_001029041 (RefSeq)
NM_001033869 (RefSeq)
zebrafish vdac1 334582 (Entrez Gene)
Chr21 NP_001001404 (RefSeq)
NM_001001404 (RefSeq)
frog, western clawed vdac1 549246 (Entrez Gene)
Chr3 NP_001016492 (RefSeq)
NM_001016492 (RefSeq)
macaque, rhesus VDAC1 710045 (Entrez Gene)
Chr6 NP_001248683 (RefSeq)
NM_001261754 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory