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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10716

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SALL4 HGNC:15924 (HGNC)
57167 (Entrez Gene)
607343 (OMIM)
Chr20 q13.2 Chr20:51784012-51802509 (-)
GRCh38
Duane-Radial Ray Syndrome; DRRS
IVIC Syndrome
Q9UJQ4 (UniProt | EBI)
NM_020436 (RefSeq)
mouse Sall4 MGI:2139360 (MGI)
99377 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 88.99 cM Chr2:168748332-168767943 (-)
GRCm38
Duane-Radial Ray Syndrome; DRRS
Otitis Media, Susceptibility to
OTTMUSG00000016116 (VEGA)
OTTMUSP00000017238 (VEGA)
OTTMUST00000038511 (VEGA)
rat Sall4 686412 (Entrez Gene)
Chr3 XP_001074001 (RefSeq)
chimpanzee SALL4 458342 (Entrez Gene)
Chr20 XP_514728 (RefSeq)
rhesus macaque SALL4 700309 (Entrez Gene)
Chr10 XP_001093669 (RefSeq)
cattle SALL4 541170 (Entrez Gene)
Chr13 NP_001179765 (RefSeq)
NM_001192836 (RefSeq)
dog SALL4 485931 (Entrez Gene)
Chr24 XP_543055 (RefSeq)
chicken SALL4 769286 (Entrez Gene)
Chr20 NP_001074341 (RefSeq)
NM_001080872 (RefSeq)
western clawed frog sall4 407860 (Entrez Gene)
ChrUN NP_001001458 (RefSeq)
NM_001001458 (RefSeq)
zebrafish sall4 572527 (Entrez Gene)
Chr23 NP_001074078 (RefSeq)
NM_001080609 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory