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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10708

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMIM8 HGNC:21401 (HGNC)
57150 (Entrez Gene)
HGNC homology
Chr6 q15 Chr6:87322588-87342328 (+)
GRCh38.p7
Q96KF7 (UniProt | EBI)
NM_020425 (RefSeq)
mouse Smim8 MGI:1913541 (MGI)
66291 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 16.86 cM Chr4:34768664-34778396 (-)
GRCm38
66291 (NCBI Gene Model)
Q9CQQ0 (UniProt | EBI)
NM_025471 (RefSeq)
rat Smim8 297971 (Entrez Gene)
Chr5 q21 NP_001188302 (RefSeq)
NM_001201376 (RefSeq)
chimpanzee SMIM8 742210 (Entrez Gene)
Chr6 XP_001153852 (RefSeq)
cattle SMIM8 533179 (Entrez Gene)
Chr9 A2VDV9 (UniProt | EBI)
NM_001081531 (RefSeq)
dog SMIM8 474988 (Entrez Gene)
Chr12 XP_532225 (RefSeq)
chicken SMIM8 421827 (Entrez Gene)
Chr3 NP_001264949 (RefSeq)
NM_001278020 (RefSeq)
zebrafish smim8 554139 (Entrez Gene)
Chr20 Q502E5 (UniProt | EBI)
NM_001271743 (RefSeq)
frog, western clawed smim8 549088 (Entrez Gene)
Chr5 Q28GF4 (UniProt | EBI)
NM_001016334 (RefSeq)
macaque, rhesus SMIM8 700543 (Entrez Gene)
Chr4 XP_028703209 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory