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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
107079

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PHC1 HGNC:3182 (HGNC)
1911 (Entrez Gene)
602978 (OMIM)
PHC1 (MyGene.info)
HGNC homology
Chr12 p13.31 Chr12:8914664-8941467 (+)
GRCh38.p7
primary autosomal recessive microcephaly 11
P78364 (UniProt | EBI)
NM_004426 (RefSeq)
mouse Phc1 MGI:103248 (MGI)
13619 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 57.52 cM Chr6:122317731-122340227 (-)
GRCm38
dilated cardiomyopathy
tetralogy of Fallot
13619 (NCBI Gene Model)
Q64028 (UniProt | EBI)
NM_001355215 (RefSeq)
rat Phc1 312690 (Entrez Gene)
Chr4 q42 NP_001101356 (RefSeq)
NM_001107886 (RefSeq)
chimpanzee PHC1 465374 (Entrez Gene)
Chr12 XP_016778406 (RefSeq)
cattle PHC1 540021 (Entrez Gene)
Chr5 NP_001192685 (RefSeq)
NM_001205756 (RefSeq)
chicken PHC1 418252 (Entrez Gene)
Chr1 NP_001006249 (RefSeq)
NM_001006249 (RefSeq)
frog, western clawed phc1 100488113 (Entrez Gene)
ChrUN XP_017945297 (RefSeq)
macaque, rhesus PHC1 722268 (Entrez Gene)
Chr11 NP_001247835 (RefSeq)
NM_001260906 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory