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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10700

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PLXDC1 HGNC:20945 (HGNC)
57125 (Entrez Gene)
606826 (OMIM)
PLXDC1 (MyGene.info)
HGNC homology
Chr17 q12 Chr17:39063303-39151649 (-)
GRCh38.p7
Q8IUK5 (UniProt | EBI)
NM_020405 (RefSeq)
mouse Plxdc1 MGI:1919574 (MGI)
72324 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 61.31 cM Chr11:97923238-97986444 (-)
GRCm38
ENSMUSG00000017417 (Ensembl Gene Model)
ENSMUSP00000103191 (Ensembl)
ENSMUST00000107565 (Ensembl)
rat Plxdc1 303505 (Entrez Gene)
Chr10 q31 NP_001100516 (RefSeq)
NM_001107046 (RefSeq)
chimpanzee PLXDC1 454623 (Entrez Gene)
Chr17 XP_016786278 (RefSeq)
cattle PLXDC1 536989 (Entrez Gene)
Chr19 NP_001092547 (RefSeq)
NM_001099077 (RefSeq)
dog PLXDC1 491032 (Entrez Gene)
Chr9 XP_022278733 (RefSeq)
chicken PLXDC1 771862 (Entrez Gene)
Chr27 XP_015155010 (RefSeq)
frog, western clawed plxdc1 101732893 (Entrez Gene)
Chr10 XP_012808384 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory