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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10679

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RPGRIP1 HGNC:13436 (HGNC)
57096 (Entrez Gene)
605446 (OMIM)
Chr14 q11 Chr14:21287977-21351301 (+)
GRCh38
Cone-Rod Dystrophy 13; CORD13
Leber Congenital Amaurosis 6; LCA6
Q96KN7 (UniProt | EBI)
NM_020366 (RefSeq)
mouse Rpgrip1 MGI:1932134 (MGI)
77945 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 26.81 cM Chr14:52110704-52163546 (+)
GRCm38
Leber Congenital Amaurosis 6; LCA6
OTTMUSG00000042894 (VEGA)
OTTMUSP00000063152 (VEGA)
OTTMUST00000112682 (VEGA)
rat Rpgrip1 305850 (Entrez Gene)
Chr15 p14 XP_006221993 (RefSeq)
NM_001030035 (RefSeq)
chimpanzee RPGRIP1 473331 (Entrez Gene)
Chr14 XP_528702 (RefSeq)
rhesus macaque LOC707961 707961 (Entrez Gene)
Chr7 XP_002808500 (RefSeq)
cattle RPGRIP1 282656 (Entrez Gene)
Chr10 Q9GLM3 (UniProt | EBI)
NM_181034 (RefSeq)
dog RPGRIP1 475400 (Entrez Gene)
Chr15 XP_851597 (RefSeq)
western clawed frog rpgrip1 100497908 (Entrez Gene)
ChrUN XP_002939974 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory