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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10665

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC12A5 HGNC:13818 (HGNC)
57468 (Entrez Gene)
606726 (OMIM)
Chr20 q13.12 Chr20:46021690-46060150 (+)
GRCh38
Q9H2X9 (UniProt | EBI)
NM_020708 (RefSeq)
mouse Slc12a5 MGI:1862037 (MGI)
57138 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 85.28 cM Chr2:164960816-164999727 (+)
GRCm38
OTTMUSG00000019699 (VEGA)
OTTMUSP00000001056 (VEGA)
OTTMUST00000002164 (VEGA)
rat Slc12a5 171373 (Entrez Gene)
Chr3 q42 Q63633 (UniProt | EBI)
NM_134363 (RefSeq)
chimpanzee SLC12A5 458295 (Entrez Gene)
Chr20 XP_009435665 (RefSeq)
rhesus macaque SLC12A5 707974 (Entrez Gene)
Chr10 XP_001104494 (RefSeq)
cattle SLC12A5 510157 (Entrez Gene)
Chr13 NP_001193309 (RefSeq)
NM_001206380 (RefSeq)
dog SLC12A5 485905 (Entrez Gene)
Chr24 XP_005635409 (RefSeq)
chicken SLC12A5 777252 (Entrez Gene)
Chr20 XP_001236722 (RefSeq)
western clawed frog slc12a5 779759 (Entrez Gene)
ChrUN NP_001072306 (RefSeq)
NM_001078838 (RefSeq)
zebrafish si:ch211-59d13.2 572215 (Entrez Gene)
Chr6 XP_009301028 (RefSeq)
slc12a5b 797331 (Entrez Gene)
Chr8 NP_001289172 (RefSeq)
NM_001302243 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory