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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10599

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human C1GALT1 HGNC:24337 (HGNC)
56913 (Entrez Gene)
610555 (OMIM)
HGNC homology
Chr7 p22.1-p21.3 Chr7:7182547-7248651 (+)
GRCh38.p7
Q9NS00 (UniProt | EBI)
NM_020156 (RefSeq)
mouse C1galt1 MGI:2151071 (MGI)
94192 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 3.37 cM Chr6:7845224-7872042 (+)
GRCm38
94192 (NCBI Gene Model)
Q9JJ06 (UniProt | EBI)
NM_052993 (RefSeq)
rat C1galt1 65044 (Entrez Gene)
Chr4 q21 Q9JJ05 (UniProt | EBI)
NM_022950 (RefSeq)
chimpanzee C1GALT1 472288 (Entrez Gene)
Chr7 XP_001143970 (RefSeq)
cattle C1GALT1 539417 (Entrez Gene)
Chr4 Q0VC84 (UniProt | EBI)
NM_001076160 (RefSeq)
dog C1GALT1 482314 (Entrez Gene)
Chr14 XP_022283090 (RefSeq)
chicken C1GALT1 420575 (Entrez Gene)
Chr2 Q5F3G7 (UniProt | EBI)
NM_001012557 (RefSeq)
frog, western clawed c1galt1 100487794 (Entrez Gene)
ChrUN XP_002938761 (RefSeq)
macaque, rhesus C1GALT1 696870 (Entrez Gene)
Chr3 XP_028701869 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/06/2019
MGI 6.14
The Jackson Laboratory