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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
105262

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPP1CA HGNC:9281 (HGNC)
5499 (Entrez Gene)
176875 (OMIM)
Chr11 q13 Chr11:67398181-67401905 (-)
GRCh38
P62136 (UniProt | EBI)
NM_001008709 (RefSeq)
mouse Ppp1ca MGI:103016 (MGI)
19045 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 3.89 cM Chr19:4192174-4195419 (+)
GRCm38
19045 (NCBI Gene Model)
P62137 (UniProt | EBI)
NM_031868 (RefSeq)
rat Ppp1ca 24668 (Entrez Gene)
Chr1 q43 P62138 (UniProt | EBI)
NM_031527 (RefSeq)
chimpanzee PPP1CA 745709 (Entrez Gene)
Chr11 XP_001151893 (RefSeq)
rhesus macaque PPP1CA 721735 (Entrez Gene)
Chr14 XP_001117941 (RefSeq)
cattle PPP1CA 516175 (Entrez Gene)
Chr29 Q3T0E7 (UniProt | EBI)
NM_001035316 (RefSeq)
dog PPP1CA 403609 (Entrez Gene)
Chr18 Q8WMS6 (UniProt | EBI)
NM_001003064 (RefSeq)
zebrafish ppp1caa 407980 (Entrez Gene)
Chr3 NP_999976 (RefSeq)
NM_214811 (RefSeq)
ppp1cab 327301 (Entrez Gene)
Chr12 NP_997875 (RefSeq)
NM_212710 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory