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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
10508

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GABARAP HGNC:4067 (HGNC)
11337 (Entrez Gene)
605125 (OMIM)
Chr17 p13.1 Chr17:7240419-7242434 (-)
GRCh38
O95166 (UniProt | EBI)
NM_007278 (RefSeq)
mouse Gabarap MGI:1861742 (MGI)
56486 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 42.95 cM Chr11:69991143-69994951 (+)
GRCm38
OTTMUSG00000006020 (VEGA)
OTTMUSP00000006254 (VEGA)
OTTMUST00000013495 (VEGA)
rat Gabarap 58974 (Entrez Gene)
Chr10 q24 P60517 (UniProt | EBI)
NM_172036 (RefSeq)
chimpanzee GABARAP 748888 (Entrez Gene)
Chr17 XP_003315392 (RefSeq)
rhesus macaque GABARAP 714597 (Entrez Gene)
Chr16 NP_001247958 (RefSeq)
NM_001261029 (RefSeq)
GABARAP 695627 (Entrez Gene)
Chr13 XP_001086014 (RefSeq)
GABARAP 702827 (Entrez Gene)
Chr13 XP_001097295 (RefSeq)
cattle GABARAP 327715 (Entrez Gene)
Chr19 Q9GJW7 (UniProt | EBI)
NM_001034048 (RefSeq)
dog GABARAP 479479 (Entrez Gene)
Chr5 XP_536616 (RefSeq)
zebrafish gabarapa 326974 (Entrez Gene)
Chr5 NP_001013278 (RefSeq)
NM_001013260 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory