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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10473

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXD8 HGNC:5139 (HGNC)
3234 (Entrez Gene)
142985 (OMIM)
HOXD8 (MyGene.info)
HGNC homology
Chr2 q31.1 Chr2:176129694-176132695 (+)
GRCh38.p7
P13378 (UniProt | EBI)
NM_001199746 (RefSeq)
mouse Hoxd8 MGI:96209 (MGI)
15437 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 44.13 cM Chr2:74704615-74707933 (+)
GRCm38
15437 (NCBI Gene Model)
P23463 (UniProt | EBI)
NM_008276 (RefSeq)
chimpanzee HOXD8 459763 (Entrez Gene)
Chr2B A2T748 (UniProt | EBI)
NM_001081481 (RefSeq)
cattle HOXD8 100295814 (Entrez Gene)
Chr2 XP_002685357 (RefSeq)
dog HOXD8 100687992 (Entrez Gene)
Chr36 XP_005640466 (RefSeq)
chicken HOXD8 396301 (Entrez Gene)
Chr7 P23459 (UniProt | EBI)
NM_207177 (RefSeq)
frog, western clawed hoxd8 100216142 (Entrez Gene)
Chr9 NP_001135589 (RefSeq)
NM_001142117 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/07/2020
MGI 6.14
The Jackson Laboratory