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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10406

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SDK2 HGNC:19308 (HGNC)
54549 (Entrez Gene)
607217 (OMIM)
SDK2 (MyGene.info)
HGNC homology
Chr17 q25.1 Chr17:73334384-73644482 (-)
GRCh38.p7
Q58EX2 (UniProt | EBI)
NM_019064 (RefSeq)
mouse Sdk2 MGI:2443847 (MGI)
237979 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 79.3 cM Chr11:113776374-114067046 (-)
GRCm38
ENSMUSG00000041592 (Ensembl Gene Model)
ENSMUSP00000038972 (Ensembl)
ENSMUST00000041627 (Ensembl)
rat Sdk2 360652 (Entrez Gene)
Chr10 q32.1 NP_001101773 (RefSeq)
NM_001108303 (RefSeq)
chimpanzee SDK2 454860 (Entrez Gene)
Chr17 XP_009431466 (RefSeq)
cattle SDK2 100336619 (Entrez Gene)
Chr19 XP_024836860 (RefSeq)
dog SDK2 483283 (Entrez Gene)
Chr9 XP_022278457 (RefSeq)
chicken SDK2 395215 (Entrez Gene)
Chr18 Q8AV57 (UniProt | EBI)
NM_204538 (RefSeq)
zebrafish sdk2b 564922 (Entrez Gene)
Chr12 XP_009305142 (RefSeq)
frog, western clawed sdk2 100485585 (Entrez Gene)
Chr10 XP_012808666 (RefSeq)
macaque, rhesus SDK2 699027 (Entrez Gene)
Chr16 XP_014975718 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory