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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
104027

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB5B HGNC:9784 (HGNC)
5869 (Entrez Gene)
179514 (OMIM)
Chr12 q13 Chr12:55973913-55996683 (+)
GRCh38
P61020 (UniProt | EBI)
NM_002868 (RefSeq)
mouse Rab5b MGI:105938 (MGI)
19344 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 77.13 cM Chr10:128677193-128696268 (-)
GRCm38
ENSMUSG00000000711 (Ensembl Gene Model)
ENSMUSP00000000727 (Ensembl)
ENSMUST00000000727 (Ensembl)
rat Rab5b 288779 (Entrez Gene)
Chr7 q11 NP_001073405 (RefSeq)
NM_001079936 (RefSeq)
chimpanzee RAB5B 746457 (Entrez Gene)
Chr12 XP_003313654 (RefSeq)
rhesus macaque LOC708347 708347 (Entrez Gene)
Chr11 XP_001096821 (RefSeq)
cattle RAB5B 539150 (Entrez Gene)
Chr5 NP_001193120 (RefSeq)
NM_001206191 (RefSeq)
dog RAB5B 474394 (Entrez Gene)
Chr10 XP_531627 (RefSeq)
chicken RAB5B 100529061 (Entrez Gene)
ChrUN Q5ZHW4 (UniProt | EBI)
NM_001199848 (RefSeq)
western clawed frog rab5b 448258 (Entrez Gene)
ChrUN NP_001005723 (RefSeq)
NM_001005723 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory