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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
104

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human F5 HGNC:3542 (HGNC)
2153 (Entrez Gene)
612309 (OMIM)
Chr1 q23 Chr1:169511954-169586531 (-)
GRCh38
Budd-Chiari Syndrome; BDCHS
Factor V Deficiency
Pregnancy Loss, Recurrent, Susceptibility to, 1; RPRGL1
Stroke, Ischemic
Thrombophilia Due to Activated Protein C Resistance; THPH2
P12259 (UniProt | EBI)
NM_000130 (RefSeq)
mouse F5 MGI:88382 (MGI)
14067 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 71.46 cM Chr1:164151838-164220277 (+)
GRCm38
OTTMUSG00000034808 (VEGA)
OTTMUSP00000048218 (VEGA)
OTTMUST00000088478 (VEGA)
rat F5 304929 (Entrez Gene)
Chr13 q22 NP_001041343 (RefSeq)
NM_001047878 (RefSeq)
chimpanzee F5 457500 (Entrez Gene)
Chr1 XP_513984 (RefSeq)
rhesus macaque F5 704695 (Entrez Gene)
Chr1 XP_001093072 (RefSeq)
dog F5 100685858 (Entrez Gene)
Chr7 XP_003435037 (RefSeq)
chicken F5 374052 (Entrez Gene)
Chr1 XP_001231901 (RefSeq)
western clawed frog f5 100135376 (Entrez Gene)
ChrUN XP_002935820 (RefSeq)
zebrafish f5 327320 (Entrez Gene)
Chr9 NP_001007209 (RefSeq)
NM_001007208 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory