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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10389

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCDH18 HGNC:14268 (HGNC)
54510 (Entrez Gene)
608287 (OMIM)
PCDH18 (MyGene.info)
HGNC homology
Chr4 q28.3 Chr4:137518918-137532530 (-)
GRCh38.p7
Q9HCL0 (UniProt | EBI)
NM_019035 (RefSeq)
mouse Pcdh18 MGI:1920423 (MGI)
73173 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 21.67 cM Chr3:49743296-49757325 (-)
GRCm38
ENSMUSG00000037892 (Ensembl Gene Model)
ENSMUSP00000039245 (Ensembl)
ENSMUST00000035931 (Ensembl)
rat Pcdh18 295027 (Entrez Gene)
Chr2 q26 NP_001093994 (RefSeq)
NM_001100524 (RefSeq)
chimpanzee PCDH18 461491 (Entrez Gene)
Chr4 XP_009446563 (RefSeq)
cattle PCDH18 539464 (Entrez Gene)
Chr17 A7MB46 (UniProt | EBI)
NM_001102229 (RefSeq)
dog PCDH18 100686323 (Entrez Gene)
Chr19 XP_003432524 (RefSeq)
chicken PCDH18 422438 (Entrez Gene)
Chr4 XP_004940992 (RefSeq)
frog, western clawed pcdh18 496568 (Entrez Gene)
Chr1 NP_001011150 (RefSeq)
NM_001011150 (RefSeq)
macaque, rhesus PCDH18 698420 (Entrez Gene)
Chr5 XP_014994700 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory