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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10384

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TMCO1 HGNC:18188 (HGNC)
54499 (Entrez Gene)
614123 (OMIM)
Chr1 q22-q25 Chr1:165724291-165768922 (-)
GRCh38
Craniofacial Dysmorphism, Skeletal Anomalies, and Mental Retardation Syndrome; CFSMR
Q9UM00 (UniProt | EBI)
NM_019026 (RefSeq)
mouse Tmco1 MGI:1921173 (MGI)
68944 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 74.69 cM Chr1:167308670-167333978 (+)
GRCm38
68944 (NCBI Gene Model)
Q921L3 (UniProt | EBI)
NM_001039483 (RefSeq)
rat Tmco1 289196 (Entrez Gene)
Chr13 q23 Q5I0H4 (UniProt | EBI)
NM_001009631 (RefSeq)
chimpanzee TMCO1 469565 (Entrez Gene)
Chr1 XP_524948 (RefSeq)
cattle TMCO1 614715 (Entrez Gene)
Chr3 Q3T0N3 (UniProt | EBI)
NM_001034766 (RefSeq)
dog LOC478992 478992 (Entrez Gene)
Chr38 XP_549626 (RefSeq)
chicken TMCO1 427100 (Entrez Gene)
Chr8 XP_424693 (RefSeq)
western clawed frog tmco1 548724 (Entrez Gene)
ChrUN NP_001015970 (RefSeq)
NM_001015970 (RefSeq)
zebrafish tmco1 378980 (Entrez Gene)
Chr8 NP_001002575 (RefSeq)
NM_001002575 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory