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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10352

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TREM2 HGNC:17761 (HGNC)
54209 (Entrez Gene)
605086 (OMIM)
Chr6 p21.1 Chr6:41158506-41163186 (-)
GRCh38
Polycystic Lipomembranous Osteodysplasia with Sclerosing Leukoencephalopathy;
Q9NZC2 (UniProt | EBI)
NM_018965 (RefSeq)
mouse Trem2 MGI:1913150 (MGI)
83433 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 23.99 cM Chr17:48346401-48354147 (+)
GRCm38
OTTMUSG00000021045 (VEGA)
OTTMUSP00000023120 (VEGA)
OTTMUST00000049782 (VEGA)
chimpanzee TREM2 748470 (Entrez Gene)
Chr6 XP_001174108 (RefSeq)
rhesus macaque TREM2 719740 (Entrez Gene)
Chr4 XP_001117305 (RefSeq)
cattle TREM2 506467 (Entrez Gene)
Chr23 NP_001073048 (RefSeq)
NM_001079580 (RefSeq)
dog TREM2 608965 (Entrez Gene)
Chr12 XP_005627370 (RefSeq)
chicken TREM2 419920 (Entrez Gene)
Chr26 NP_001032921 (RefSeq)
NM_001037832 (RefSeq)
western clawed frog trem2 100126214 (Entrez Gene)
ChrUN NP_001103522 (RefSeq)
NM_001110052 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory