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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10340

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CLN8 HGNC:2079 (HGNC)
2055 (Entrez Gene)
607837 (OMIM)
Chr8 p23 Chr8:1755778-1786570 (+)
GRCh38
Ceroid Lipofuscinosis, Neuronal, 8, Northern Epilepsy Variant
Ceroid Lipofuscinosis, Neuronal, 8; CLN8
Q9UBY8 (UniProt | EBI)
NM_018941 (RefSeq)
mouse Cln8 MGI:1349447 (MGI)
26889 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 7.59 cM Chr8:14881335-14901720 (+)
GRCm38
Ceroid Lipofuscinosis, Neuronal, 8; CLN8
OTTMUSG00000032854 (VEGA)
OTTMUSP00000043850 (VEGA)
OTTMUST00000081864 (VEGA)
rat Cln8 306619 (Entrez Gene)
Chr16 q12.5 Q6AYM9 (UniProt | EBI)
NM_001007686 (RefSeq)
chimpanzee CLN8 463962 (Entrez Gene)
Chr8 XP_519584 (RefSeq)
rhesus macaque CLN8 716441 (Entrez Gene)
Chr8 NP_001180979 (RefSeq)
NM_001194050 (RefSeq)
cattle CLN8 530874 (Entrez Gene)
Chr27 NP_001069409 (RefSeq)
NM_001075941 (RefSeq)
dog CLN8 488558 (Entrez Gene)
Chr37 Q5JZQ7 (UniProt | EBI)
NM_001012343 (RefSeq)
chicken CLN8 421902 (Entrez Gene)
Chr3 NP_001026258 (RefSeq)
NM_001031087 (RefSeq)
western clawed frog cln8 100489515 (Entrez Gene)
ChrUN XP_002935196 (RefSeq)
zebrafish cln8 100136870 (Entrez Gene)
Chr17 NP_001108060 (RefSeq)
NM_001114588 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory