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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCDHB6 HGNC:8691 (HGNC)
56130 (Entrez Gene)
606332 (OMIM)
HGNC homology
Chr5 q31.3 Chr5:141150022-141153287 (+)
Q9Y5E3 (UniProt | EBI)
NM_001303145 (RefSeq)
mouse Pcdhb13 MGI:2136748 (MGI)
93884 (Entrez Gene)
Gene Tree
Chr18 19.49 cM Chr18:37442517-37446209 (+)
93884 (NCBI Gene Model)
NP_444368 (RefSeq)
NM_053138 (RefSeq)
chimpanzee PCDHB6 462130 (Entrez Gene)
Chr5 Q5DRC8 (UniProt | EBI)
NM_001013009 (RefSeq)
dog LOC487173 487173 (Entrez Gene)
Chr2 XP_038514590 (RefSeq)
macaque, rhesus LOC699998 699998 (Entrez Gene)
Chr6 XP_001090348 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.16
The Jackson Laboratory