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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10338

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCDHB6 HGNC:8691 (HGNC)
56130 (Entrez Gene)
606332 (OMIM)
HGNC homology
Chr5 q31.3 Chr5:141150022-141153287 (+)
GRCh38.p7
Q9Y5E3 (UniProt | EBI)
NM_001303145 (RefSeq)
mouse Pcdhb13 MGI:2136748 (MGI)
93884 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 19.49 cM Chr18:37442517-37446209 (+)
GRCm38
93884 (NCBI Gene Model)
NP_444368 (RefSeq)
NM_053138 (RefSeq)
chimpanzee PCDHB6 462130 (Entrez Gene)
Chr5 Q5DRC8 (UniProt | EBI)
NM_001013009 (RefSeq)
dog LOC487173 487173 (Entrez Gene)
Chr2 XP_038514590 (RefSeq)
macaque, rhesus LOC699998 699998 (Entrez Gene)
Chr6 XP_001090348 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/23/2021
MGI 6.16
The Jackson Laboratory