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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRDM5 HGNC:9349 (HGNC)
11107 (Entrez Gene)
614161 (OMIM)
HGNC homology
Chr4 q25-q26 Chr4:120684928-120922866 (-)
Brittle Cornea Syndrome 2; BCS2
Q9NQX1 (UniProt | EBI)
NM_001300824 (RefSeq)
mouse Prdm5 MGI:1918029 (MGI)
70779 (Entrez Gene)
Gene Tree
HGNC homology
Chr6 30.32 cM Chr6:65778988-65936373 (+)
OTTMUSG00000036961 (VEGA)
OTTMUSP00000052972 (VEGA)
OTTMUST00000094991 (VEGA)
rat Prdm5 689788 (Entrez Gene)
Chr4 q31 XP_002726428 (RefSeq)
chimpanzee PRDM5 461462 (Entrez Gene)
Chr4 XP_009446485 (RefSeq)
rhesus macaque PRDM5 708790 (Entrez Gene)
Chr5 XP_001097268 (RefSeq)
cattle PRDM5 537500 (Entrez Gene)
Chr6 NP_001179836 (RefSeq)
NM_001192907 (RefSeq)
dog PRDM5 483850 (Entrez Gene)
Chr19 XP_540970 (RefSeq)
chicken PRDM5 422673 (Entrez Gene)
Chr4 XP_420628 (RefSeq)
western clawed frog prdm5 100487368 (Entrez Gene)
ChrUN XP_012811006 (RefSeq)
zebrafish prdm5 432371 (Entrez Gene)
Chr23 NP_001002301 (RefSeq)
NM_001002301 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.01
The Jackson Laboratory