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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
102202

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IFFO2 HGNC:27006 (HGNC)
126917 (Entrez Gene)
HGNC homology
Chr1 p36.13 Chr1:18904280-18956672 (-)
GRCh38.p7
Q5TF58 (UniProt | EBI)
NM_001136265 (RefSeq)
mouse Iffo2 MGI:2140675 (MGI)
212632 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 70.73 cM Chr4:139530548-139620382 (+)
GRCm38
212632 (NCBI Gene Model)
Q8R2V2 (UniProt | EBI)
NM_001205173 (RefSeq)
rat Iffo2 641315 (Entrez Gene)
Chr5 q36 P0C6R4 (UniProt | EBI)
NM_001134703 (RefSeq)
chimpanzee IFFO2 100612108 (Entrez Gene)
Chr1 XP_016810711 (RefSeq)
dog IFFO2 100688342 (Entrez Gene)
Chr2 XP_005617955 (RefSeq)
chicken IFFO2 419468 (Entrez Gene)
Chr21 XP_003642578 (RefSeq)
zebrafish iffo2a 100150502 (Entrez Gene)
Chr23 XP_021329319 (RefSeq)
frog, western clawed iffo2 100144962 (Entrez Gene)
Chr7 XP_031761372 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory