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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1020

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CTSO HGNC:2542 (HGNC)
1519 (Entrez Gene)
600550 (OMIM)
Cathepsin O (MyGene.info)
HGNC homology
Chr4 q32.1 Chr4:155924118-155953896 (-)
GRCh38.p7
P43234 (UniProt | EBI)
NM_001334 (RefSeq)
mouse Ctso MGI:2139628 (MGI)
229445 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 35.97 cM Chr3:81932601-81956725 (+)
GRCm38
OTTMUSG00000026582 (VEGA)
OTTMUSP00000032821 (VEGA)
OTTMUST00000065770 (VEGA)
chimpanzee CTSO 461567 (Entrez Gene)
Chr4 XP_517502 (RefSeq)
cattle CTSO 616804 (Entrez Gene)
Chr17 XP_002694471 (RefSeq)
dog CTSO 482665 (Entrez Gene)
Chr15 XP_005629509 (RefSeq)
chicken CTSO 422410 (Entrez Gene)
Chr4 NP_001026300 (RefSeq)
NM_001031129 (RefSeq)
zebrafish ctso 567333 (Entrez Gene)
Chr14 XP_021328556 (RefSeq)
frog, western clawed ctso 100496370 (Entrez Gene)
ChrUN
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory