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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10196

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KDM3A HGNC:20815 (HGNC)
55818 (Entrez Gene)
611512 (OMIM)
Chr2 p11.2 Chr2:86441148-86492716 (+)
GRCh38
Q9Y4C1 (UniProt | EBI)
NM_018433 (RefSeq)
mouse Kdm3a MGI:98847 (MGI)
104263 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 32.18 cM Chr6:71588974-71632905 (-)
GRCm38
Obesity
ENSMUSG00000053470 (Ensembl Gene Model)
ENSMUSP00000065716 (Ensembl)
ENSMUST00000065509 (Ensembl)
rat Kdm3a 312440 (Entrez Gene)
Chr4 q33 Q63679 (UniProt | EBI)
NM_175764 (RefSeq)
chimpanzee KDM3A 470424 (Entrez Gene)
Chr2A XP_525805 (RefSeq)
rhesus macaque KDM3A 697775 (Entrez Gene)
Chr13 XP_001086319 (RefSeq)
cattle KDM3A 536073 (Entrez Gene)
Chr11 NP_001179801 (RefSeq)
NM_001192872 (RefSeq)
dog KDM3A 475763 (Entrez Gene)
Chr17 XP_532973 (RefSeq)
chicken KDM3A 422917 (Entrez Gene)
Chr4 Q5ZIX8 (UniProt | EBI)
NM_001012891 (RefSeq)
western clawed frog kdm3a 100379807 (Entrez Gene)
ChrUN XP_002937329 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory