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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10189

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPATA7 HGNC:20423 (HGNC)
55812 (Entrez Gene)
609868 (OMIM)
Chr14 q31.3 Chr14:88385644-88470350 (+)
GRCh38
Leber Congenital Amaurosis 3; LCA3
Q9P0W8 (UniProt | EBI)
NM_018418 (RefSeq)
mouse Spata7 MGI:2144877 (MGI)
104871 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 49.88 cM Chr12:98628157-98669815 (+)
GRCm38
OTTMUSG00000023264 (VEGA)
OTTMUSP00000027056 (VEGA)
OTTMUST00000056323 (VEGA)
rat Spata7 192225 (Entrez Gene)
Chr6 q32 Q9R0A3 (UniProt | EBI)
NM_138862 (RefSeq)
chimpanzee SPATA7 453088 (Entrez Gene)
Chr14 NP_001092018 (RefSeq)
NM_001098548 (RefSeq)
rhesus macaque SPATA7 693836 (Entrez Gene)
Chr7 XP_001082933 (RefSeq)
cattle SPATA7 510352 (Entrez Gene)
Chr10 NP_001092398 (RefSeq)
NM_001098928 (RefSeq)
dog SPATA7 480411 (Entrez Gene)
Chr8 XP_537532 (RefSeq)
chicken SPATA7 423397 (Entrez Gene)
Chr5 XP_421307 (RefSeq)
western clawed frog spata7 100498037 (Entrez Gene)
ChrUN XP_002933241 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory