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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
100946

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC30A10 HGNC:25355 (HGNC)
55532 (Entrez Gene)
611146 (OMIM)
Chr1 q41 Chr1:219913919-219958910 (-)
GRCh38
Hypermanganesemia with Dystonia, Polycythemia, and Cirrhosis; HMDPC
Q6XR72 (UniProt | EBI)
NM_018713 (RefSeq)
mouse Slc30a10 MGI:2685058 (MGI)
226781 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 89.53 cM Chr1:185454848-185468762 (+)
GRCm38
226781 (NCBI Gene Model)
Q3UVU3 (UniProt | EBI)
NM_001033286 (RefSeq)
rat Slc30a10 289353 (Entrez Gene)
Chr13 q26 NP_001099455 (RefSeq)
NM_001105985 (RefSeq)
chimpanzee SLC30A10 469681 (Entrez Gene)
Chr1 XP_525065 (RefSeq)
rhesus macaque SLC30A10 706999 (Entrez Gene)
Chr1 XP_001103570 (RefSeq)
cattle SLC30A10 508385 (Entrez Gene)
Chr16 NP_001179109 (RefSeq)
NM_001192180 (RefSeq)
chicken SLC30A10 421349 (Entrez Gene)
Chr3 XP_419410 (RefSeq)
zebrafish slc30a10 555724 (Entrez Gene)
Chr13 NP_001121706 (RefSeq)
NM_001128234 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory