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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
100608

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPP1CC HGNC:9283 (HGNC)
5501 (Entrez Gene)
176914 (OMIM)
Chr12 q24.1-q24.2 Chr12:110709016-110742978 (-)
GRCh38
P36873 (UniProt | EBI)
NM_002710 (RefSeq)
mouse Gm5601 MGI:3647492 (MGI)
434233 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 64.15 cM Chr7:119740128-119741099 (+)
GRCm38
OTTMUSG00000022793 (VEGA)
XP_006544330 (RefSeq)
OTTMUST00000054756 (VEGA)
chimpanzee PPP1CC 462795 (Entrez Gene)
Chr12 XP_001144540 (RefSeq)
rhesus macaque PPP1CC 709935 (Entrez Gene)
Chr11 NP_001244760 (RefSeq)
NM_001257831 (RefSeq)
cattle PPP1CC 282318 (Entrez Gene)
Chr17 P61287 (UniProt | EBI)
NM_174581 (RefSeq)
dog PPP1CC 403557 (Entrez Gene)
Chr26 Q8MJ46 (UniProt | EBI)
NM_001003033 (RefSeq)
chicken PPP1CC 416872 (Entrez Gene)
Chr15 NP_001006190 (RefSeq)
NM_001006190 (RefSeq)
western clawed frog ppp1cc 407879 (Entrez Gene)
ChrUN Q6NVU2 (UniProt | EBI)
NM_213670 (RefSeq)
zebrafish ppp1cc 571753 (Entrez Gene)
Chr5 XP_700468 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory