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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10003

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human EFHC1 HGNC:16406 (HGNC)
114327 (Entrez Gene)
608815 (OMIM)
Chr6 p12.3 Chr6:52420196-52495785 (+)
GRCh38
Epilepsy, Juvenile Absence, Susceptibility to, 1; EJA1
Epilepsy, Myoclonic Juvenile; EJM
Q5JVL4 (UniProt | EBI)
NM_018100 (RefSeq)
mouse Efhc1 MGI:1919127 (MGI)
71877 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 6.5 cM Chr1:20951626-20990838 (+)
GRCm38
Epilepsy, Myoclonic Juvenile; EJM
OTTMUSG00000029838 (VEGA)
OTTMUSP00000038413 (VEGA)
OTTMUST00000074047 (VEGA)
rat Efhc1 301295 (Entrez Gene)
Chr9 q13 NP_001116419 (RefSeq)
NM_001122947 (RefSeq)
chimpanzee EFHC1 462765 (Entrez Gene)
Chr6 NP_001267272 (RefSeq)
NM_001280343 (RefSeq)
rhesus macaque EFHC1 708517 (Entrez Gene)
Chr4 NP_001252792 (RefSeq)
NM_001265863 (RefSeq)
cattle EFHC1 510124 (Entrez Gene)
Chr23 NP_001179173 (RefSeq)
NM_001192244 (RefSeq)
dog EFHC1 474935 (Entrez Gene)
Chr12 XP_532170 (RefSeq)
chicken EFHC1 422041 (Entrez Gene)
Chr3 XP_420047 (RefSeq)
zebrafish efhc1 393942 (Entrez Gene)
Chr20 NP_957261 (RefSeq)
NM_200967 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory