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Gene Expression Literature Summary
Symbol
Name
ID
H3f3a
H3.3 histone A
MGI:1097686

16 matching records from 16 references.

Summary by Age and Assay: Numbers in the table indicate the number of results matching the search criteria.
Age E0.5 E1 E2 E2.5 E3 E7.5 E8.5 E9.5 E10 E10.5 E11.5 E12.5 E13 E13.5 E14.5 E15 E15.5 E16 E16.5 E17 E18 E18.5 E19 P
Immunohistochemistry (section) 1 1 1 1 1
In situ RNA (section) 1 2 1 1 3
In situ reporter (knock in) 1 1 1 3 1 1 1 1 1
Northern blot 1 1 2 2 1 1 1 1 1 1 1 2
Western blot 1 1 1 1 1 1 1
RT-PCR 1 1 1 1 2 1 1 3
cDNA clones 2

Summary by Gene and Reference: Number indicates the number of results matching the search criteria recorded for each reference.
* Indicates detailed expression data entries available
H3f3a  H3.3 histone A   (Synonyms: H3-3a, H3.3A)
Results  Reference
3*J:93300 Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL, Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
2J:100324 Bulfone A, Carotenuto P, Faedo A, Aglio V, Garzia L, Bello AM, Basile A, Andre A, Cocchia M, Guardiola O, Ballabio A, Rubenstein JL, Zollo M, Telencephalic embryonic subtractive sequences: a unique collection of neurodevelopmental genes. J Neurosci. 2005 Aug 17;25(33):7586-600
15*J:58812 Couldrey C, Carlton MB, Nolan PM, Colledge WH, Evans MJ, A retroviral gene trap insertion into the histone 3.3A gene causes partial neonatal lethality, stunted growth, neuromuscular deficits and male sub-fertility in transgenic mice. Hum Mol Genet. 1999 Dec;8(13):2489-95
1*J:153498 Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, Nurnberger A, SchmidtK, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
1J:85917 Hart A, Papadopoulou S, Edlund H, Fgf10 maintains notch activation, stimulates proliferation, and blocks differentiation of pancreatic epithelial cells. Dev Dyn. 2003 Oct;228(2):185-93
3J:225909 Jang CW, Shibata Y, Starmer J, Yee D, Magnuson T, Histone H3.3 maintains genome integrity during mammalian development. Genes Dev. 2015 Jul 1;29(13):1377-92
1J:256001 Jung EM, Moffat JJ, Liu J, Dravid SM, Gurumurthy CB, Kim WY, Arid1b haploinsufficiency disrupts cortical interneuron development and mouse behavior. Nat Neurosci. 2017 Dec;20(12):1694-1707
2J:89028 Klezovitch O, Fernandez TE, Tapscott SJ, Vasioukhin V, Loss of cell polarity causes severe brain dysplasia in Lgl1 knockout mice. Genes Dev. 2004 Mar 1;18(5):559-71
1J:195178 Linke M, May A, Reifenberg K, Haaf T, Zechner U, The impact of ovarian stimulation on the expression of candidate reprogramming genes in mouse preimplantation embryos. Cytogenet Genome Res. 2013;139(2):71-9
8*J:41139 Lopez-Alanon DM, Lopez-Fernandez LA, Castaneda V, Krimer DB, Del Mazo J, H3.3A variant histone mRNA containing an alpha-globin insertion: modulated expression during mouse gametogenesis correlates with meiotic onset. DNA Cell Biol. 1997 May;16(5):639-44
5*J:44153 Lopez-Fernandez LA, Lopez-Alanon DM, Castaneda V, Krimer DB, del Mazo J, Developmental expression of H3.3A variant histone mRNA in mouse. Int J Dev Biol. 1997 Oct;41(5):699-703
1J:161421 Mann W, Haaf T, Single cell RT-PCR on mouse embryos: a general approach for developmental biology. Methods Mol Biol. 2010;630:3-12
4*J:145796 May A, Kirchner R, Muller H, Hartmann P, El Hajj N, Tresch A, Zechner U, Mann W, Haaf T, Multiplex rt-PCR expression analysis of developmentally important genes in individual mouse preimplantation embryos and blastomeres. Biol Reprod. 2009 Jan;80(1):194-202
3J:224007 Tang MC, Jacobs SA, Mattiske DM, Soh YM, Graham AN, Tran A, Lim SL, Hudson DF, Kalitsis P, O'Bryan MK, Wong LH, Mann JR, Contribution of the two genes encoding histone variant h3.3 to viability and fertility in mice. PLoS Genet. 2015 Feb;11(2):e1004964
2J:194069 Tang MC, Jacobs SA, Wong LH, Mann JR, Conditional allelic replacement applied to genes encoding the histone variant H3.3 in the mouse. Genesis. 2013 Feb;51(2):142-6
7J:255060 Xia W, Jiao J, Histone variant H3.3 orchestrates neural stem cell differentiation in the developing brain. Cell Death Differ. 2017 Sep;24(9):1548-1563

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
03/31/2020
MGI 6.15
The Jackson Laboratory